Gene

pan3

ID
ZDB-GENE-070928-13
Name
poly(A) specific ribonuclease subunit PAN3
Symbol
pan3 Nomenclature History
Previous Names
  • zgc:171628
Type
protein_coding_gene
Location
Chr: 24 Mapping Details/Browsers
Description
Predicted to contribute to poly(A)-specific ribonuclease activity. Predicted to be involved in deadenylation-dependent decapping of nuclear-transcribed mRNA; nuclear-transcribed mRNA poly(A) tail shortening; and positive regulation of cytoplasmic mRNA processing body assembly. Predicted to localize to P-body and PAN complex. Orthologous to human PAN3 (poly(A) specific ribonuclease subunit PAN3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pan3 Human Ortholog
No data available
Associated With pan3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000571 Zinc finger, CCCH-type
Domain IPR041332 Pan3 pseudokinase domain
Family IPR030844 PAN2-PAN3 deadenylation complex subunit PAN3
Homologous_superfamily IPR011009 Protein kinase-like domain superfamily
Homologous_superfamily IPR036855 Zinc finger, CCCH-type superfamily
Domain Details Per Protein
Protein Length PAN2-PAN3 deadenylation complex subunit PAN3 Pan3 pseudokinase domain Protein kinase-like domain superfamily Zinc finger, CCCH-type Zinc finger, CCCH-type superfamily
UniProtKB:E7EXP6 799
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pan3-201 (1) Ensembl 4,368 nt
mRNA pan3-204 (1) Ensembl 1,409 nt
ncRNA pan3-003 (1) Ensembl 2,757 nt
ncRNA pan3-004 (1) Ensembl 555 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations