ZFIN ID: ZDB-GENE-070521-2

Gene Name:AT hook containing transcription factor 1
Gene Symbol: ahctf1

Previous Names: flo, elys(1) , fa02e01, wu:fa02e01(1)
Nomenclature History

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GENE EXPRESSION:(current status)

All expression data:	4 figure(s) from 2 publications
Wild Type Stages, Structures:	Blastula:1k-cell (3.00h-3.33h) to Larval:Day 5 (120.00h-144.00h, 3.9mm, 6 teeth)
	forebrain, hindbrain ... (all 17)
Curated microarray expression:	GEO  (1)

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MUTANTS AND TARGETED KNOCKDOWNS:

Mutant line(s):   5 genotypes
Allele(s):   s871, ti262c

Phenotype: (current status)

Data:	13 figures from 4 publications
Observed in:	anatomical system, cell, cell, ceratobranchial cartilage, chromatin binding ... (all 38)

Knockdown reagents: MO1-ahctf1 (1) ,   MO2-ahctf1 (1) ,   MO3-ahctf1 (1)

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GENE PRODUCTS:

Gene Ontology

Ontology	GO Term
Biological Process	digestive tract development (more)

All GO Terms (2)

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SEGMENT (CLONE AND PROBE) RELATIONSHIPS:

ahctf1 Contained in	[BAC] DKEY-3I24 (1)    (order this) , RP71-84D9 (1)    (order this)
ahctf1 Contains	[SNP] rs3728847 (1)
ahctf1 Encodes	[EST] fa02e01

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SEQUENCE INFORMATION:

Type	Accession #	Length (bp/aa)	Analysis
RNA	GenBank:BC139865 (1)	3221 bp	- Select Tool - ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:AL954168 (1)	205011 bp	- Select Tool - MegaBLAST
Polypeptide	UniProtKB:A5D6S7 (1)	981 aa	- Select Tool - ZFIN BLAST Ensembl SIB BLAST
Sequence Clusters	UniGene:156162 (1)
All Sequence Information (13)

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OTHER  ahctf1  GENE / MARKER PAGES:

Entrez Gene:553494 (1)

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MAPPING INFORMATION:

LG:  17  Details

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ORTHOLOGY:

				Evidence
Species	Symbol	Chromosome (Position)	Accession #	AA	CL
Zebrafish	ahctf1	17
Human	AHCTF1	1 (q44)	OMIM:610853 Entrez Gene:25909
Mouse	Ahctf1	Unknown	MGI:1915033 Entrez Gene:226747
Orthology Details

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CITATIONS   (18)