ZFIN is now using GRCz12tu for Genomic Data
Gene
spef2
- ID
- ZDB-GENE-060526-47
- Name
- sperm flagellar and cilia associated 2
- Symbol
- spef2 Nomenclature History
- Previous Names
-
- si:ch211-149f21.2
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Human ortholog(s) of this gene implicated in spermatogenic failure 43. Orthologous to human SPEF2 (sperm flagellar and cilia associated 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| spermatogenic failure 43 | Alliance | Spermatogenic failure 43 | 618751 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001715 | Calponin homology domain |
| Domain | IPR010441 | CH-like domain in sperm protein |
| Domain | IPR054517 | CPC1/SPEF2 domain D5 |
| Domain | IPR056199 | SPEF2, C-terminal domain |
| Family | IPR052634 | Sperm flagellar development and bone growth associated protein |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| Homologous_superfamily | IPR036872 | CH domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Calponin homology domain | CH domain superfamily | CH-like domain in sperm protein | CPC1/SPEF2 domain D5 | P-loop containing nucleoside triphosphate hydrolase | SPEF2, C-terminal domain | Sperm flagellar development and bone growth associated protein |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3AZ97 | InterPro | 1703 | |||||||
| UniProtKB:A0A8M3B259 | InterPro | 1704 | |||||||
| UniProtKB:A0A8M3AS40 | InterPro | 1705 | |||||||
| UniProtKB:A0A8M3B9C1 | InterPro | 1107 | |||||||
| UniProtKB:A0A8M3ARW9 | InterPro | 1625 | |||||||
| UniProtKB:A0A0R4IPA7 | InterPro | 1639 | |||||||
| UniProtKB:A0AC58JJ23 | InterPro | 1705 | |||||||
| UniProtKB:A0AC58JJ24 | InterPro | 1704 | |||||||
| UniProtKB:A0AC58JJ27 | InterPro | 1625 | |||||||
| UniProtKB:A0AC58JJ28 | InterPro | 1626 | |||||||
| UniProtKB:A0AC58JJ29 | InterPro | 1623 | |||||||
| UniProtKB:A0AC58JJ34 | InterPro | 1706 | |||||||
| UniProtKB:A0AC58JJ36 | InterPro | 1624 | |||||||
| UniProtKB:A0AC58JJ39 | InterPro | 1703 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers