Gene

abi2b

ID

ZDB-GENE-060519-5

Name

abl-interactor 2b

Symbol

abi2b Nomenclature History

Previous Names

zgc:136560

Type

protein_coding_gene

Location

Chr: 6 Mapping Details/Browsers

Description

Predicted to enable signaling adaptor activity. Predicted to be involved in cell projection morphogenesis and neuron migration. Predicted to be located in cytoskeleton and filopodium. Predicted to be part of SCAR complex. Predicted to be active in actin-based cell projection and lamellipodium. Orthologous to human ABI2 (abl interactor 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With abi2b Human Ortholog

No data available

Associated With abi2b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000727	Target SNARE coiled-coil homology domain
Domain	IPR001452	SH3 domain
Domain	IPR012849	Abl-interactor, homeo-domain homologous domain
Domain	IPR035726	Abl interactor 2, SH3 domain
Family	IPR028457	ABI family
Homologous_superfamily	IPR036028	SH3-like domain superfamily

Domain Details Per Protein

Protein	Length	ABI family	Abl interactor 2, SH3 domain	Abl-interactor, homeo-domain homologous domain	SH3 domain	SH3-like domain superfamily	Target SNARE coiled-coil homology domain
UniProtKB:Q1JPU9 InterPro	461
UniProtKB:A0A8M9PM97 InterPro	441
UniProtKB:I3IRV8 InterPro	490
UniProtKB:A0A8M9Q683 InterPro	495
UniProtKB:A0A8M3AT64 InterPro	545
UniProtKB:I3ITI8 InterPro	574
UniProtKB:A0A8M2BD24 InterPro	525
UniProtKB:A0A8M9PZX3 InterPro	519
UniProtKB:A0A8M2BD18 InterPro	568
UniProtKB:A0A8M2BD58 InterPro	496
UniProtKB:A0A8M9QAG4 InterPro	573
UniProtKB:A0A8M9QFJ3 InterPro	489
UniProtKB:I3IS53 InterPro	447
UniProtKB:A0A8M9QAG8 InterPro	460

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	abi2b-201 (1) Ensembl	Ensembl	1,961 nt	Select Tool ZFIN BLAST
mRNA	abi2b-202 (1) Ensembl	Ensembl	1,725 nt	Select Tool ZFIN BLAST
mRNA	abi2b-203 (1) Ensembl	Ensembl	1,352 nt	Select Tool ZFIN BLAST
mRNA	abi2b-204 (1) Ensembl	Ensembl	835 nt	Select Tool ZFIN BLAST
mRNA	abi2b-205 (1) Ensembl	Ensembl	596 nt	Select Tool ZFIN BLAST
mRNA	abi2b-206 (1) Ensembl	Ensembl	1,473 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations