Gene
ptbp2a
- ID
- ZDB-GENE-050320-141
- Name
- polypyrimidine tract binding protein 2a
- Symbol
- ptbp2a Nomenclature History
- Previous Names
-
- zgc:113074 (1)
- Type
- protein_coding_gene
- Location
- Chr: 24 Mapping Details/Browsers
- Description
- Predicted to have mRNA binding activity. Predicted to be involved in negative regulation of RNA splicing and regulation of translation. Predicted to localize to nucleus. Orthologous to human PTBP2 (polypyrimidine tract binding protein 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:113074 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000504 | RNA recognition motif domain |
| Domain | IPR021790 | PTBP1-like, RNA recognition motif 2 |
| Domain | IPR034800 | PTBP2, RNA recognition motif 4 |
| Family | IPR006536 | HnRNP-L/PTB |
| Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
Domain Details Per Protein
| Protein | Length | HnRNP-L/PTB | Nucleotide-binding alpha-beta plait domain superfamily | PTBP1-like, RNA recognition motif 2 | PTBP2, RNA recognition motif 4 | RNA-binding domain superfamily | RNA recognition motif domain |
|---|---|---|---|---|---|---|---|
|
UniProtKB:A0A8M6Z4P9
|
319 | ||||||
|
UniProtKB:A0A8M6YY33
|
490 | ||||||
|
UniProtKB:A0A0R4IZG6
|
512 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ptbp2a-201
(1)
|
Ensembl | 556 nt | ||
| mRNA |
ptbp2a-202
(1)
|
Ensembl | 1,882 nt | ||
| ncRNA |
ptbp2a-003
(1)
|
Ensembl | 569 nt |
Interactions and Pathways
No data available
Plasmids
No data available