Gene

sgf29

ID
ZDB-GENE-041010-62
Name
SAGA complex associated factor 29
Symbol
sgf29 Nomenclature History
Previous Names
  • ccdc101
  • zgc:103544
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Predicted to have RNA polymerase II transcription regulator recruiting activity and methylated histone binding activity. Predicted to be involved in histone H3 acetylation. Predicted to localize to Ada2/Gcn5/Ada3 transcription activator complex and SAGA complex. Human ortholog(s) of this gene implicated in diabetic retinopathy. Orthologous to human SGF29 (SAGA complex associated factor 29).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With sgf29 Human Ortholog
No data available
Associated With sgf29 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR010750 SGF29 tudor-like domain
Domain IPR047287 SAGA-associated factor 29, second Tudor domain
Domain IPR047288 SAGA-associated factor 29, first Tudor domain
Family IPR037802 SAGA-associated factor 29
Domain Details Per Protein
Protein Length SAGA-associated factor 29 SAGA-associated factor 29, first Tudor domain SAGA-associated factor 29, second Tudor domain SGF29 tudor-like domain
UniProtKB:F1QQW7 293
UniProtKB:Q5XJ83 249
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA sgf29-201 (1) Ensembl 1,359 nt
mRNA sgf29-202 (1) Ensembl 769 nt
mRNA sgf29-203 (1) Ensembl 867 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations