Gene

cln6a

ID
ZDB-GENE-041010-57
Name
CLN6 transmembrane ER protein a
Symbol
cln6a Nomenclature History
Previous Names
  • cln6
  • zgc:103565
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Description
Predicted to be involved in lysosome organization. Predicted to localize to endoplasmic reticulum. Human ortholog(s) of this gene implicated in neuronal ceroid lipofuscinosis; neuronal ceroid lipofuscinosis 4A; and neuronal ceroid lipofuscinosis 6. Orthologous to human CLN6 (CLN6 transmembrane ER protein).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With cln6a Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
neuronal ceroid lipofuscinosis 6A Alliance Ceroid lipofuscinosis, neuronal, 6A 601780
neuronal ceroid lipofuscinosis 6B Alliance Ceroid lipofuscinosis, neuronal, 6B (Kufs type) 204300
Associated With cln6a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR029255 Ceroid-lipofuscinosis neuronal protein 6
Domain Details Per Protein
Protein Length Ceroid-lipofuscinosis neuronal protein 6
UniProtKB:Q5XJ78 298
UniProtKB:A0A8M2BGW5 299
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA cln6a-201 (1) Havana 1748 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations