ZFIN is now using GRCz12tu for Genomic Data
Gene
adam17b
- ID
- ZDB-GENE-041001-199
- Name
- ADAM metallopeptidase domain 17b
- Symbol
- adam17b Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 20 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable metalloendopeptidase activity. Predicted to be involved in Notch signaling pathway and membrane protein ectodomain proteolysis. Predicted to act upstream of or within proteolysis. Predicted to be located in membrane. Predicted to be active in plasma membrane. Human ortholog(s) of this gene implicated in Alzheimer's disease; inflammatory bowel disease; and type 2 diabetes mellitus. Orthologous to human ADAM17 (ADAM metallopeptidase domain 17).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| neonatal inflammatory skin and bowel disease 1 | Alliance | ?Inflammatory skin and bowel disease, neonatal, 1 | 614328 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001590 | Peptidase M12B, ADAM/reprolysin |
| Domain | IPR001762 | Disintegrin domain |
| Domain | IPR032029 | ADAM17, membrane-proximal domain |
| Domain | IPR034025 | ADAM10/ADAM17 catalytic domain |
| Family | IPR051489 | Disintegrin and Metalloproteinase Domain-Containing |
| Homologous_superfamily | IPR024079 | Metallopeptidase, catalytic domain superfamily |
| Homologous_superfamily | IPR036436 | Disintegrin domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | ADAM10/ADAM17 catalytic domain | ADAM17, membrane-proximal domain | Disintegrin and Metalloproteinase Domain-Containing | Disintegrin domain | Disintegrin domain superfamily | Metallopeptidase, catalytic domain superfamily | Peptidase M12B, ADAM/reprolysin |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:U3JAD1 | InterPro | 843 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
adam17b-201
(1)
|
Ensembl | 3,149 nt | ||
| mRNA |
adam17b-202
(1)
|
Ensembl | 2,424 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers