ZFIN ID: ZDB-GENE-040827-1

Gene Name:intraflagellar transport 172
Gene Symbol: ift172

Previous Names: moe(1) , LIM-interacting protein(1)
Nomenclature History

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GENE EXPRESSION:(current status)

Curated microarray expression:

GEO  (1)

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MUTANTS AND TARGETED KNOCKDOWNS:

Mutant line(s):   5 genotypes
Allele(s):   hi2211Tg

Phenotype: (current status)

Data:	3 figures from 3 publications
Observed in:	eye, kidney, post-vent region, pronephros, retinal photoreceptor layer ... (all 6)

Knockdown reagent: MO1-ift172 (1)

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GENE PRODUCTS:

Gene Ontology

Ontology	GO Term
Biological Process	pronephros development (more)
Cellular Component	cell projection (more)

All GO Terms (7)

Protein Families, Domains and Sites:

InterPro:IPR001680 (1) InterPro:IPR011044 (1) InterPro:IPR011046 (1) InterPro:IPR015943 (1) InterPro:IPR019781 (1)

PROSITE:PS00678 (1) PROSITE:PS50005 (1) PROSITE:PS50082 (1) PROSITE:PS50293 (1) PROSITE:PS50294 (1)

Pfam:PF00400 (1)

Gene Product Description

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SEGMENT (CLONE AND PROBE) RELATIONSHIPS:

ift172 Contained in	[BAC] DKEY-221H15 (1)    (order this)
ift172 Encodes	[cDNA] MGC:195072 (1)    (order this)

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SEQUENCE INFORMATION:

Type	Accession #	Length (bp/aa)	Analysis
RNA	RefSeq:NM_001002312 (1)	5650 bp	- Select Tool - ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX511178 (1)	187362 bp	- Select Tool - MegaBLAST Ensembl
Polypeptide	UniProtKB:B3DK94 (1)	1745 aa	- Select Tool - ZFIN BLAST Ensembl SIB BLAST
Sequence Clusters	UniGene:19771 (1)
All Sequence Information (12)

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OTHER  ift172  GENE / MARKER PAGES:

Entrez Gene:432389 (1)

VEGA:OTTDARG00000006088 (1)

Ensembl(Zv8):ENSDARG00000041870 (1)

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MAPPING INFORMATION:

LG:  20  Details

View Map: Merged  Individual Panels

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ORTHOLOGY:

				Evidence
Species	Symbol	Chromosome (Position)	Accession #	AA	CL
Zebrafish	ift172	20
Human	IFT172	2 (p23.3)	OMIM:607386 Entrez Gene:26160
Mouse	Ift172	5 (syntenic)	MGI:2682064 Entrez Gene:67661
Orthology Details

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CITATIONS   (20)