Gene

syf2

ID
ZDB-GENE-040801-170
Name
SYF2 pre-mRNA-splicing factor
Symbol
syf2 Nomenclature History
Previous Names
  • hm:zeh0031
  • zeh0031
  • zgc:113871
  • zgc:92835 (1)
Type
protein_coding_gene
Location
Chr: 13 Mapping Details/Browsers
Description
Predicted to be involved in mRNA splicing, via spliceosome. Predicted to localize to Prp19 complex; U2-type catalytic step 2 spliceosome; and post-mRNA release spliceosomal complex. Orthologous to human SYF2 (SYF2 pre-mRNA splicing factor).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Chen et al., 2012
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With syf2 Human Ortholog
No data available
Associated With syf2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR013260 mRNA splicing factor SYF2
Domain Details Per Protein
Protein Length mRNA splicing factor SYF2
UniProtKB:Q6DGP2 238
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA syf2-201 (1) Ensembl 998 nt
ncRNA syf2-002 (1) Ensembl 798 nt
ncRNA syf2-003 (1) Ensembl 714 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations