Gene

psmc1b

ID
ZDB-GENE-040625-69
Name
proteasome 26S subunit, ATPase 1b
Symbol
psmc1b Nomenclature History
Previous Names
  • wu:fj14c10 (1)
  • zgc:86923
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to have TBP-class protein binding activity and proteasome-activating ATPase activity. Predicted to be involved in protein catabolic process. Predicted to localize to proteasome regulatory particle, base subcomplex. Orthologous to human PSMC1 (proteasome 26S subunit, ATPase 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Link et al., 2006
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With psmc1b Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
neurodevelopmental disorder with poor growth, spastic tetraplegia, and hearing loss Alliance ?Birk-Aharoni syndrome 620071
Associated With psmc1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR003960 ATPase, AAA-type, conserved site
Domain IPR003593 AAA+ ATPase domain
Domain IPR003959 ATPase, AAA-type, core
Domain IPR032501 Proteasomal ATPase, second OB domain
Domain IPR041569 AAA ATPase, AAA+ lid domain
Homologous_superfamily IPR012340 Nucleic acid-binding, OB-fold
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Domain Details Per Protein
Protein Length AAA ATPase, AAA+ lid domain AAA+ ATPase domain ATPase, AAA-type, conserved site ATPase, AAA-type, core Nucleic acid-binding, OB-fold P-loop containing nucleoside triphosphate hydrolase Proteasomal ATPase, second OB domain
UniProtKB:Q6IQ72 440
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA psmc1b-201 (1) Havana 1501 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations