Gene
sltm
- ID
- ZDB-GENE-040426-2647
- Name
- SAFB-like, transcription modulator
- Symbol
- sltm Nomenclature History
- Previous Names
-
- wu:fd12b08
- zgc:65985
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Description
- Predicted to have sequence-specific DNA binding activity. Predicted to be involved in regulation of mRNA processing and regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Orthologous to human SLTM (SAFB like transcription modulator).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR000504 | RNA recognition motif domain |
Domain | IPR003034 | SAP domain |
Family | IPR051738 | Scaffold Attachment Factor and Modulators |
Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
Homologous_superfamily | IPR036361 | SAP domain superfamily |
Domain Details Per Protein
Protein | Length | Nucleotide-binding alpha-beta plait domain superfamily | RNA-binding domain superfamily | RNA recognition motif domain | SAP domain | SAP domain superfamily | Scaffold Attachment Factor and Modulators |
---|---|---|---|---|---|---|---|
UniProtKB:F1Q6F9
|
983 |
Type | Name | Annotation Method | Length (nt) | Analysis |
---|---|---|---|---|
aberrant processed transcript |
sltm-204
(1)
|
Havana | 595 nt | |
mRNA |
sltm-203
(1)
|
Havana | 805 nt | |
mRNA |
sltm-205
(1)
|
Havana | 449 nt | |
mRNA |
sltm-207
(1)
|
Havana | 9342 nt | |
mRNA |
sltm-209
(1)
|
Ensembl | 2002 nt | |
ncRNA |
sltm-004
(1)
|
Havana | 445 nt | |
ncRNA |
sltm-005
(1)
|
Havana | 1290 nt | |
ncRNA |
sltm-007
(1)
|
Havana | 740 nt | |
ncRNA |
sltm-008
(1)
|
Havana | 680 nt |
Interactions and Pathways
No data available
Plasmids
No data available