Gene

fubp1

ID

ZDB-GENE-040426-2159

Name

far upstream element (FUSE) binding protein 1

Symbol

fubp1 Nomenclature History

Previous Names

wu:fa92h11
wu:fb24h11
wu:fc26f06
zgc:66046 (1)

Type

protein_coding_gene

Location

Chr: 2 Mapping Details/Browsers

Description

Enables mRNA 3'-UTR binding activity. Acts upstream of or within regulation of gene expression. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in hepatocellular carcinoma. Orthologous to human FUBP1 (far upstream element binding protein 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With fubp1 Human Ortholog

No data available

Associated With fubp1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR004087	K Homology domain
Domain	IPR004088	K Homology domain, type 1
Domain	IPR015096	Far upstream element-binding protein, C-terminal
Domain	IPR048250	Far upstream element-binding protein 1, second type I KH domain
Domain	IPR048251	Far upstream element-binding protein 1, third type I KH domain
Domain	IPR048252	Far upstream element-binding protein 1, fourth type I KH domain
Homologous_superfamily	IPR036612	K Homology domain, type 1 superfamily

Domain Details Per Protein

Protein	Length	Far upstream element-binding protein 1, fourth type I KH domain	Far upstream element-binding protein 1, second type I KH domain	Far upstream element-binding protein 1, third type I KH domain	Far upstream element-binding protein, C-terminal	K Homology domain	K Homology domain, type 1	K Homology domain, type 1 superfamily
UniProtKB:A0A8M3AW34 InterPro	645
UniProtKB:A0A8M3AZ76 InterPro	662
UniProtKB:A0A8M3ANN4 InterPro	640
UniProtKB:Q6P2A9 InterPro	642
UniProtKB:A0A8M3B6R5 InterPro	637