ZFIN is now using GRCz12tu for Genomic Data
Gene
thumpd1
- ID
- ZDB-GENE-040426-1805
- Name
- THUMP domain containing 1
- Symbol
- thumpd1 Nomenclature History
- Previous Names
-
- zgc:77221
- Type
- protein_coding_gene
- Location
- Chr: 1 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable protein-tRNA adaptor activity. Predicted to be involved in tRNA modification. Predicted to be active in nucleus. Is expressed in female organism. Human ortholog(s) of this gene implicated in speech disorder. Orthologous to human THUMPD1 (THUMP domain 1 NAT10 acetyltransferase adaptor).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:77221 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Neurodevelopmental disorder with speech delay and variable ocular anomalies | 619989 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | THUMP domain | THUMP domain-containing protein 1-like |
|---|---|---|---|---|
| UniProtKB:A0A0R4IIV9 | InterPro | 343 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
thumpd1-201
(1)
|
Ensembl | 1,361 nt | ||
| mRNA |
thumpd1-202
(1)
|
Ensembl | 1,032 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers