ZFIN is now using GRCz12tu for Genomic Data
Gene
tcea1
- ID
- ZDB-GENE-030131-8049
- Name
- transcription elongation factor A (SII), 1
- Symbol
- tcea1 Nomenclature History
- Previous Names
-
- fj48e12
- wu:fj48e12
- zgc:63975
- Type
- protein_coding_gene
- Location
- Chr: 2 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable DNA binding activity; translation elongation factor activity; and zinc ion binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within transcription elongation by RNA polymerase II and translational elongation. Predicted to be part of transcription factor TFIID complex. Predicted to be active in nucleus. Orthologous to human TCEA1 (transcription elongation factor A1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:63975 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001222 | Zinc finger, TFIIS-type |
| Domain | IPR003617 | Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type |
| Domain | IPR003618 | Transcription elongation factor S-II, central domain |
| Domain | IPR017923 | Transcription factor IIS, N-terminal |
| Family | IPR006289 | Transcription elongation factor, TFIIS |
| Family | IPR035100 | Transcription elongation factor, IIS-type |
| Homologous_superfamily | IPR035441 | TFIIS/LEDGF domain superfamily |
| Homologous_superfamily | IPR036575 | Transcription elongation factor S-II, central domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | TFIIS/LEDGF domain superfamily | Transcription elongation factor, IIS-type | Transcription elongation factor S-II, central domain | Transcription elongation factor S-II, central domain superfamily | Transcription elongation factor, TFIIS | Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type | Transcription factor IIS, N-terminal | Zinc finger, TFIIS-type |
|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q7T3C1 | InterPro | 309 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers