ZFIN is now using GRCz12tu for Genomic Data
Gene
spata20
- ID
- ZDB-GENE-030131-7269
- Name
- spermatogenesis associated 20
- Symbol
- spata20 Nomenclature History
- Previous Names
-
- fj02d07
- wu:fj02d07
- Type
- protein_coding_gene
- Location
- Chr: 12 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to act upstream of or within carbohydrate metabolic process. Orthologous to human SPATA20 (spermatogenesis associated 20).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR004879 | Spermatogenesis-associated protein 20-like, TRX domain |
| Family | IPR024705 | Spermatogenesis-associated protein 20 |
| Homologous_superfamily | IPR008928 | Six-hairpin glycosidase superfamily |
| Homologous_superfamily | IPR012341 | Six-hairpin glycosidase-like superfamily |
| Homologous_superfamily | IPR036249 | Thioredoxin-like superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Six-hairpin glycosidase-like superfamily | Six-hairpin glycosidase superfamily | Spermatogenesis-associated protein 20 | Spermatogenesis-associated protein 20-like, TRX domain | Thioredoxin-like superfamily |
|---|---|---|---|---|---|---|---|
| UniProtKB:E7F7E2 | InterPro | 818 | |||||
| UniProtKB:A0A8M9PAX0 | InterPro | 791 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
spata20-201
(1)
|
Ensembl | 2,943 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers