Gene

ercc4

ID
ZDB-GENE-030131-5533
Name
excision repair cross-complementation group 4
Symbol
ercc4 Nomenclature History
Previous Names
  • fancq (1)
  • fi03a05
  • wu:fi03a05
  • XPF (1)
  • zgc:63468
Type
protein_coding_gene
Location
Chr: 12 Mapping Details/Browsers
Description
Predicted to have damaged DNA binding activity; single-stranded DNA binding activity; and single-stranded DNA endodeoxyribonuclease activity. Predicted to be involved in DNA metabolic process. Predicted to localize to nucleotide-excision repair factor 1 complex. Human ortholog(s) of this gene implicated in Fanconi anemia complementation group Q; XFE progeroid syndrome; pancreatic cancer; xeroderma pigmentosum; and xeroderma pigmentosum group F. Is expressed in liver. Orthologous to human ERCC4 (ERCC excision repair 4, endonuclease catalytic subunit).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Ramanagoudr-Bhojappa et al., 2018
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ercc4 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Fanconi anemia complementation group Q Alliance Fanconi anemia, complementation group Q 615272
xeroderma pigmentosum group F Alliance Xeroderma pigmentosum, group F 278760
xeroderma pigmentosum group F Alliance Xeroderma pigmentosum, type F/Cockayne syndrome 278760
XFE progeroid syndrome Alliance XFE progeroid syndrome 610965
Associated With ercc4 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR006166 ERCC4 domain
Domain IPR047520 DNA repair endonuclease XPF, nuclease domain
Family IPR006167 DNA repair protein XPF
Homologous_superfamily IPR010994 RuvA domain 2-like
Homologous_superfamily IPR011335 Restriction endonuclease type II-like
Domain Details Per Protein
Protein Length DNA repair endonuclease XPF, nuclease domain DNA repair protein XPF ERCC4 domain Restriction endonuclease type II-like RuvA domain 2-like
UniProtKB:Q7SYE8 886
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ercc4-201 (1) Ensembl 3,210 nt
mRNA ercc4-202 (1) Ensembl 4,504 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations