Research
General Information
ZIRC
ZFIN: Gene: cbx2
ZFIN ID: ZDB-GENE-030131-5502

Gene Name:chromobox homolog 2 (Drosophila Pc class)
Gene Symbol: cbx2
Previous Names: wu:fd20e09, zgc:103563, pc1(1)
Nomenclature History


GENE EXPRESSION:(current status)
All expression data: 2 figure(s) from 2 publications
Directly submitted expression data: 1 figure(s) (1 images) from Thisse et al., 2004 [MGC:103563]
Wild Type Stages, Structures: Zygote:1-cell (0.00h-0.75h) to Hatching:Pec-fin (60.00h-72.00h)
  unspecified, whole organism
Curated microarray expression: GEO  (1)

MUTANTS AND TARGETED KNOCKDOWNS:
Phenotype: (current status)

GENE PRODUCTS:

Gene Ontology
Ontology GO Term
Biological Process chromatin assembly or disassembly
Cellular Component chromatin (more)
Molecular Function DNA binding (more)
All GO Terms (5)

Protein Families, Domains and Sites:
  • InterPro:IPR000953 (1)
  • InterPro:IPR016197 (1)
  • InterPro:IPR017956 (1)
  • PROSITE:PS00598 (1)
  • PROSITE:PS50013 (1)
  • Pfam:PF00385 (1)
  • Loading Transcript Data...

    SEGMENT (CLONE AND PROBE) RELATIONSHIPS:
    cbx2 Contained in [BAC] CH211-253B18 (1)    (order this)
    cbx2 Encodes [EST] fd20e09
    [cDNA] MGC:103563 (1)    (order this) , MGC:192035 (1)    (order this)

    SEQUENCE INFORMATION:
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_194373 (1) 2110 bp
    Genomic GenBank:BX539325 (1) 183783 bp
    Polypeptide UniProtKB:Q5U3G5 (1) 510 aa
    Sequence Clusters UniGene:78712 (1)
    All Sequence Information (14)

    OTHER  cbx2  GENE / MARKER PAGES:

  • Entrez Gene:327291 (1)
  • VEGA:OTTDARG00000019592 (1)
  • Ensembl(Zv8):ENSDARG00000044938 (1)

  • MAPPING INFORMATION:
      LG:  3    Details

    ORTHOLOGY:
      Evidence
    Species Symbol Chromosome (Position) Accession # AA
    Zebrafish cbx2  3
    Mouse Cbx2  11 (75.00 cM)
  • MGI:88289
  • Entrez Gene:12416
  • Orthology Details

    CITATIONS   (12)