ZFIN is now using GRCz12tu for Genomic Data
Gene
vwde
- ID
- ZDB-GENE-131121-540
- Name
- von Willebrand factor D and EGF domains
- Symbol
- vwde Nomenclature History
- Previous Names
-
- vwdel (1)
- si:dkey-30e9.7
- zmp:0000001015
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable signaling receptor binding activity. Predicted to be involved in animal gross anatomical part developmental process and system development. Predicted to be active in cell surface and extracellular region. Orthologous to human VWDE (von Willebrand factor D and EGF domains).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR018097 | EGF-like calcium-binding, conserved site |
| Domain | IPR000742 | EGF-like domain |
| Domain | IPR001846 | von Willebrand factor, type D domain |
| Domain | IPR001881 | EGF-like calcium-binding domain |
| Domain | IPR057885 | VWDE-like, Ig-like domain |
| Domain | IPR058727 | Vwde, helical domain |
| Family | IPR050969 | Developmental Signaling Modulators |
| PTM | IPR000152 | EGF-type aspartate/asparagine hydroxylation site |
Domain Details Per Protein
| Protein | Additional Resources | Length | Developmental Signaling Modulators | EGF-like calcium-binding, conserved site | EGF-like calcium-binding domain | EGF-like domain | EGF-type aspartate/asparagine hydroxylation site | von Willebrand factor, type D domain | Vwde, helical domain | VWDE-like, Ig-like domain |
|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A0R4IWA2 | InterPro | 1721 | ||||||||
| UniProtKB:A0AB32T8W2 | InterPro | 1664 | ||||||||
| UniProtKB:A0AC58HD73 | InterPro | 1685 | ||||||||
| UniProtKB:A0AC58HD75 | InterPro | 1742 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:dkey-30e9.7-201
(1)
|
Ensembl | 5,615 nt | ||
| mRNA |
si:dkey-30e9.7-202
(1)
|
Ensembl | 474 nt | ||
| mRNA |
si:dkey-30e9.7-203
(1)
|
Ensembl | 911 nt | ||
| mRNA |
si:dkey-30e9.7-204
(1)
|
Ensembl | 3,321 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers