Gene

patl2

ID

ZDB-GENE-121214-350

Name

PAT1 homolog 2

Symbol

patl2 Nomenclature History

Previous Names

si:ch211-103b1.2

Type

protein_coding_gene

Location

Chr: 12 Mapping Details/Browsers

Description

Predicted to have RNA binding activity. Predicted to be involved in cytoplasmic mRNA processing body assembly and deadenylation-dependent decapping of nuclear-transcribed mRNA. Predicted to localize to P-body. Orthologous to human PATL2 (PAT1 homolog 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With patl2 Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
		Oocyte/zygote/embryo maturation arrest 4	617743

Associated With patl2 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR019167	mRNA decay factor PAT1 domain
Family	IPR039900	Pat1-like

Domain Details Per Protein

Protein	Length	mRNA decay factor PAT1 domain	Pat1-like
UniProtKB:E7FAC4 InterPro	714

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	si:ch211-103b1.2-201 (1) Ensembl	Havana	2877 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	si:ch211-103b1.2-002 (1) Ensembl	Havana	539 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations