Gene
rbfox3a
- ID
- ZDB-GENE-111213-1
- Name
- RNA binding fox-1 homolog 3a
- Symbol
- rbfox3a Nomenclature History
- Previous Names
-
- rbfox3
- neun (1)
- Type
- protein_coding_gene
- Location
- Chr: 12 Mapping Details/Browsers
- Description
- Predicted to enable mRNA binding activity. Predicted to be involved in nervous system development and regulation of alternative mRNA splicing, via spliceosome. Located in nucleus. Is expressed in brain; heart; and spinal cord. Orthologous to human RBFOX3 (RNA binding fox-1 homolog 3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 5 figures from 5 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000504 | RNA recognition motif domain |
| Domain | IPR025670 | Fox-1 C-terminal domain |
| Domain | IPR034237 | FOX1, RNA recognition motif |
| Family | IPR017325 | RNA binding protein fox-1 homolog 1-3 |
| Family | IPR047131 | RNA binding protein fox-1 homolog 1-like |
| Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Fox-1 C-terminal domain | FOX1, RNA recognition motif | Nucleotide-binding alpha-beta plait domain superfamily | RNA-binding domain superfamily | RNA binding protein fox-1 homolog 1-3 | RNA binding protein fox-1 homolog 1-like | RNA recognition motif domain |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9QES8 | InterPro | 411 | |||||||
| UniProtKB:A0A8M9QET1 | InterPro | 345 | |||||||
| UniProtKB:A0A8M9PX73 | InterPro | 381 | |||||||
| UniProtKB:A0A8M9QN15 | InterPro | 387 | |||||||
| UniProtKB:A0A8M9Q953 | InterPro | 345 | |||||||
| UniProtKB:A0A8M9Q950 | InterPro | 415 | |||||||
| UniProtKB:A0A8M9PX69 | InterPro | 428 | |||||||
| UniProtKB:A0A8M9QJ91 | InterPro | 429 | |||||||
| UniProtKB:A0AB32TYJ8 | InterPro | 380 | |||||||
| UniProtKB:A0AB32TYK8 | InterPro | 383 | |||||||
| UniProtKB:A0AB32U0V9 | InterPro | 398 | |||||||
| UniProtKB:A0AB32U1P3 | InterPro | 397 | |||||||
| UniProtKB:A0AB32U4R0 | InterPro | 384 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
rbfox3a-201
(1)
|
Ensembl | 1,104 nt | ||
| mRNA |
rbfox3a-202
(1)
|
Ensembl | 7,208 nt | ||
| mRNA |
rbfox3a-203
(1)
|
Ensembl | 1,589 nt |
Interactions and Pathways
No data available
Plasmids
No data available