ZFIN is now using GRCz12tu for Genomic Data
Gene
tsnare1
- ID
- ZDB-GENE-100922-189
- Name
- T-SNARE Domain Containing 1
- Symbol
- tsnare1 Nomenclature History
- Previous Names
-
- si:ch211-208k15.1 (1)
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Unknown
- Description
- Predicted to enable SNAP receptor activity and SNARE binding activity. Predicted to be involved in intracellular protein transport and vesicle fusion. Predicted to be located in membrane. Predicted to be part of SNARE complex. Predicted to be active in synaptic vesicle. Orthologous to human TSNARE1 (t-SNARE domain containing 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Thyme et al., 2019
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | SNARE | Syntaxin | Syntaxin/epimorphin, conserved site | Syntaxin, N-terminal domain | Target SNARE coiled-coil homology domain |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A0R4IK07 | InterPro | 287 | |||||
| UniProtKB:A0AB32T5F7 | InterPro | 302 | |||||
| UniProtKB:A0AB32TGC5 | InterPro | 81 | |||||
| UniProtKB:A0AC58HKN7 | InterPro | 287 | |||||
| UniProtKB:A0AC58HKN9 | InterPro | 302 | |||||
| UniProtKB:A0AC58HKP0 | InterPro | 287 | |||||
| UniProtKB:A0AC58HKP1 | InterPro | 287 | |||||
| UniProtKB:A0AC58HKP3 | InterPro | 287 | |||||
| UniProtKB:A0AC58HKP4 | InterPro | 287 | |||||
| UniProtKB:A0AC58HKP5 | InterPro | 287 | |||||
| UniProtKB:A0AC58HKS9 | InterPro | 287 | |||||
| UniProtKB:A0AC58HKT1 | InterPro | 287 | |||||
| UniProtKB:A0AC58HKT2 | InterPro | 287 | |||||
| UniProtKB:A0AC58HKT4 | InterPro | 287 | |||||
| UniProtKB:A0AC58HKV7 | InterPro | 287 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:ch211-208k15.1-201
(1)
|
Ensembl | 1,560 nt | ||
| mRNA |
si:ch211-208k15.1-203
(1)
|
Ensembl | 3,971 nt | ||
| mRNA |
si:ch211-208k15.1-204
(1)
|
Ensembl | 4,699 nt | ||
| ncRNA |
si:ch211-208k15.1-001
(1)
|
Ensembl | 787 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers