ZFIN is now using GRCz12tu for Genomic Data
Gene
chmp6a
- ID
- ZDB-GENE-100812-5
- Name
- charged multivesicular body protein 6a
- Symbol
- chmp6a Nomenclature History
- Previous Names
-
- si:dkey-29j19.1
- Type
- protein_coding_gene
- Location
- Chr: 3 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Unknown
- Description
- Predicted to be involved in vacuolar transport. Predicted to be located in endosome membrane. Orthologous to human CHMP6 (charged multivesicular body protein 6).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR005024 | Snf7 family |
Domain Details Per Protein
| Protein | Additional Resources | Length | Snf7 family |
|---|---|---|---|
| UniProtKB:A0A8M3AR78 | InterPro | 146 | |
| UniProtKB:A0A0R4IS77 | InterPro | 199 | |
| UniProtKB:A0AC58J3Q2 | InterPro | 85 | |
| UniProtKB:A0AC58J3Q3 | InterPro | 93 | |
| UniProtKB:A0AC58J3Q4 | InterPro | 85 | |
| UniProtKB:A0AC58J3S8 | InterPro | 93 | |
| UniProtKB:A0ACD6B7I7 | InterPro | 199 | |
| UniProtKB:A0AB32TPN8 | InterPro | 185 | |
| UniProtKB:A0AB32TRR9 | InterPro | 207 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
chmp6a-201
(1)
|
Ensembl | 521 nt | ||
| mRNA |
chmp6a-202
(1)
|
Ensembl | 600 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers