Gene

ttc6

ID

ZDB-GENE-090429-2

Name

tetratricopeptide repeat domain 6

Symbol

ttc6 Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 17 Mapping Details/Browsers

Description

Orthologous to human TTC6 (tetratricopeptide repeat domain 6).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ttc6 Human Ortholog

No data available

Associated With ttc6 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR050498	Photosystem I assembly protein Ycf3
Homologous_superfamily	IPR011990	Tetratricopeptide-like helical domain superfamily
Repeat	IPR013105	Tetratricopeptide repeat 2
Repeat	IPR019734	Tetratricopeptide repeat

Domain Details Per Protein

Protein	Length	Photosystem I assembly protein Ycf3	Tetratricopeptide-like helical domain superfamily	Tetratricopeptide repeat	Tetratricopeptide repeat 2
UniProtKB:A0A8M3AU20 InterPro	1760
UniProtKB:A0A8M9PP50 InterPro	1439
UniProtKB:A0A8M9PEJ2 InterPro	1559

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	ttc6-201 (1) Ensembl	Ensembl		4,827 nt	Select Tool ZFIN BLAST
mRNA	ttc6-202 (1) Ensembl	Ensembl		1,532 nt	Select Tool ZFIN BLAST
ncRNA	ttc6-003 (1) Ensembl	Ensembl		353 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations