ZFIN is now using GRCz12tu for Genomic Data
Gene
si:dkey-219c3.2
- ID
- ZDB-GENE-090313-238
- Name
- si:dkey-219c3.2
- Symbol
- si:dkey-219c3.2 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 25 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable protein heterodimerization activity. Predicted to be involved in DNA-templated transcription initiation; regulation of DNA-templated transcription; and transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of transcription factor TFIID complex.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR003894 | TAFH/NHR1 |
| Domain | IPR007900 | Transcription initiation factor TFIID component TAF4, C-terminal |
| Family | IPR045144 | Transcription initiation factor TFIID component TAF4 |
| Homologous_superfamily | IPR009072 | Histone-fold |
| Homologous_superfamily | IPR037249 | TAFH/NHR1 domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Histone-fold | TAFH/NHR1 | TAFH/NHR1 domain superfamily | Transcription initiation factor TFIID component TAF4 | Transcription initiation factor TFIID component TAF4, C-terminal |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M6Z4F3 | InterPro | 975 | |||||
| UniProtKB:E7FFQ2 | InterPro | 976 | |||||
| UniProtKB:A0AB40EDI1 | InterPro | 949 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:dkey-219c3.2-201
(1)
|
Ensembl | 2,946 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers