Gene

ssbp2b

ID

ZDB-GENE-090312-197

Name

single stranded DNA binding protein 2b

Symbol

ssbp2b Nomenclature History

Previous Names

ssbp2
si:ch211-219m24.4

Type

protein_coding_gene

Location

Chr: 10 Mapping Details/Browsers

Description

Predicted to have single-stranded DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Orthologous to human SSBP2 (single stranded DNA binding protein 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ssbp2b Human Ortholog

No data available

Associated With ssbp2b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR006594	LIS1 homology motif
Family	IPR008116	Sequence-specific single-strand DNA-binding protein

Domain Details Per Protein

Protein	Length	LIS1 homology motif	Sequence-specific single-strand DNA-binding protein
UniProtKB:A0A0R4IQW8 InterPro	350
UniProtKB:A0A8M9PUG0 InterPro	246

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ssbp2-202 (1) Ensembl	Havana	2296 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000052105 (1) Ensembl	Havana	538 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations