Gene

pum2

ID
ZDB-GENE-081031-76
Name
pumilio RNA-binding family member 2
Symbol
pum2 Nomenclature History
Previous Names
  • si:ch1073-351m12.1
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to have mRNA 3'-UTR binding activity. Predicted to be involved in production of miRNAs involved in gene silencing by miRNA and regulation of mRNA stability. Predicted to localize to cytosol. Is expressed in several structures, including blastomere; gonad; kidney; liver; and tail bud. Orthologous to human PUM2 (pumilio RNA binding family member 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
5 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Lee et al., 2019
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pum2 Human Ortholog
No data available
Associated With pum2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR033133 Pumilio homology domain
Domain IPR033712 Pumilio, RNA binding domain
Homologous_superfamily IPR011989 Armadillo-like helical
Homologous_superfamily IPR016024 Armadillo-type fold
Repeat IPR001313 Pumilio RNA-binding repeat
Domain Details Per Protein
Protein Length Armadillo-like helical Armadillo-type fold Pumilio homology domain Pumilio, RNA binding domain Pumilio RNA-binding repeat
UniProtKB:A7LCJ6 1106
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pum2-201 (1) Ensembl 3,902 nt
mRNA pum2-202 (1) Ensembl 1,401 nt
mRNA pum2-203 (1) Ensembl 3,821 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations