Gene

si:dkey-237h12.3

ID

ZDB-GENE-081027-3

Name

si:dkey-237h12.3

Symbol

si:dkey-237h12.3 Nomenclature History

Previous Names

sb:eu654

Type

protein_coding_gene

Location

Chr: 14 Mapping Details/Browsers

Description

Predicted to have cell adhesion molecule binding activity; protein heterodimerization activity; and protein homodimerization activity. Predicted to be involved in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules and neuron development. Predicted to localize to neuron projection. Is expressed in alar plate midbrain region and optic tectum.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

6 figures from Thisse et al., 2005

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

eu654 (4 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With si:dkey-237h12.3 Human Ortholog

No data available

Associated With si:dkey-237h12.3 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000742	EGF-like domain
Domain	IPR009471	Teneurin intracellular, N-terminal
Domain	IPR022385	Rhs repeat-associated core
Domain	IPR028916	Tox-GHH domain
Family	IPR051216	Teneurin domain-containing protein
Homologous_superfamily	IPR008969	Carboxypeptidase-like, regulatory domain superfamily
Homologous_superfamily	IPR011042	Six-bladed beta-propeller, TolB-like
Repeat	IPR006530	YD repeat

Domain Details Per Protein

Protein	Length	Carboxypeptidase-like, regulatory domain superfamily	EGF-like domain	Rhs repeat-associated core	Six-bladed beta-propeller, TolB-like	Teneurin domain-containing protein	Teneurin intracellular, N-terminal	Tox-GHH domain	YD repeat
UniProtKB:A0A8M9PUL7 InterPro	2439
UniProtKB:A0A8M9Q5C9 InterPro	2432
UniProtKB:A0A8M9PNF3 InterPro	2445
UniProtKB:A0A8M9QGV6 InterPro	2711
UniProtKB:A0A8M9QPK0 InterPro	2704

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	si:dkey-237h12.3-201 (1) Ensembl	Ensembl	8,572 nt	Select Tool
mRNA	si:dkey-237h12.3-202 (1) Ensembl	Ensembl	2,824 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-237h12.3-203 (1) Ensembl	Ensembl	11,658 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-237h12.3-204 (1) Ensembl	Ensembl	2,563 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-237h12.3-205 (1) Ensembl	Ensembl	2,828 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-237h12.3-206 (1) Ensembl	Ensembl	11,571 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations