Gene

nova2

ID
ZDB-GENE-080211-1
Name
NOVA alternative splicing regulator 2
Symbol
nova2 Nomenclature History
Previous Names
  • id:ibd1128
  • sb:cb364
Type
protein_coding_gene
Location
Chr: 15 Mapping Details/Browsers
Description
Predicted to have mRNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome and regulation of alternative mRNA splicing, via spliceosome. Predicted to localize to cytoplasm and nucleus. Is expressed in nervous system; neural plate; and posterior cardinal vein. Orthologous to human NOVA2 (NOVA alternative splicing regulator 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
9 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from Baek et al., 2019
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With nova2 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Neurodevelopmental disorder with or without autistic features and/or structural brain abnormalities 618859
Associated With nova2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR004087 K Homology domain
Domain IPR004088 K Homology domain, type 1
Domain IPR047274 RNA-binding protein Nova-1/2, type I K Homology domain 3
Domain IPR047275 RNA-binding protein Nova-1/2, type I K Homology domain 1
Domain IPR047276 RNA-binding protein Nova-1/2, type I K Homology domain 2
Homologous_superfamily IPR036612 K Homology domain, type 1 superfamily
Domain Details Per Protein
Protein Length K Homology domain K Homology domain, type 1 K Homology domain, type 1 superfamily RNA-binding protein Nova-1/2, type I K Homology domain 1 RNA-binding protein Nova-1/2, type I K Homology domain 2 RNA-binding protein Nova-1/2, type I K Homology domain 3
UniProtKB:F1R4G7 496
UniProtKB:X1WBB9 517
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA nova2-201 (1) Ensembl 1,951 nt
mRNA nova2-203 (1) Ensembl 8,894 nt
mRNA nova2-204 (1) Ensembl 2,372 nt
mRNA nova2-205 (1) Ensembl 2,309 nt
ncRNA nova2-003 (1) Ensembl 356 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations