ZFIN is now using GRCz12tu for Genomic Data
Gene
si:dkey-11f4.16
- ID
- ZDB-GENE-070912-357
- Name
- si:dkey-11f4.16
- Symbol
- si:dkey-11f4.16 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 9 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable signaling receptor activity. Predicted to be involved in several processes, including heterotypic cell-cell adhesion; immune response; and natural killer cell activation. Predicted to be located in membrane. Predicted to be active in external side of plasma membrane. Is expressed in pronephric duct. Orthologous to human CD58 (CD58 molecule).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cssl:d179 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | CD2/SLAM family receptor | Immunoglobulin I-set | Immunoglobulin-like domain | Immunoglobulin-like domain superfamily | Immunoglobulin-like fold |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9QB15 | InterPro | 782 | |||||
| UniProtKB:A0A8M9QJX1 | InterPro | 717 | |||||
| UniProtKB:A0A8M9Q4S1 | InterPro | 782 | |||||
| UniProtKB:A0AB13AA95 | InterPro | 782 | |||||
| UniProtKB:A0AB32TY64 | InterPro | 781 | |||||
| UniProtKB:A0AB32U051 | InterPro | 717 | |||||
| UniProtKB:A0AC58GEY9 | InterPro | 781 | |||||
| UniProtKB:A0AC58GEZ3 | InterPro | 781 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:dkey-11f4.16-201
(1)
|
Ensembl | 611 nt | ||
| mRNA |
si:dkey-11f4.16-202
(1)
|
Ensembl | 672 nt | ||
| mRNA |
si:dkey-11f4.16-203
(1)
|
Ensembl | 521 nt | ||
| mRNA |
si:dkey-11f4.16-205
(1)
|
Ensembl | 877 nt | ||
| mRNA |
si:dkey-11f4.16-206
(1)
|
Ensembl | 727 nt | ||
| ncRNA |
si:dkey-11f4.16-005
(1)
|
Ensembl | 586 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers