Gene

sema5ba

ID
ZDB-GENE-070912-187
Name
sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5Ba
Symbol
sema5ba Nomenclature History
Previous Names
  • sema5b
  • si:ch211-208i8.1
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to have semaphorin receptor binding activity. Involved in axonogenesis involved in innervation and sensory perception of touch. Predicted to localize to integral component of membrane. Orthologous to human SEMA5B (semaphorin 5B).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With sema5ba Human Ortholog
No data available
Associated With sema5ba Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001627 Sema domain
Domain IPR016201 PSI domain
Family IPR027231 Semaphorin
Homologous_superfamily IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Homologous_superfamily IPR036352 Sema domain superfamily
Homologous_superfamily IPR036383 Thrombospondin type-1 (TSP1) repeat superfamily
Repeat IPR000884 Thrombospondin type-1 (TSP1) repeat
Repeat IPR002165 Plexin repeat
Domain Details Per Protein
Protein Length Plexin repeat PSI domain Sema domain Sema domain superfamily Semaphorin Thrombospondin type-1 (TSP1) repeat Thrombospondin type-1 (TSP1) repeat superfamily WD40/YVTN repeat-like-containing domain superfamily
UniProtKB:A0A8M2BFB2 984
UniProtKB:F1QPQ6 1101
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA sema5ba-202 (1) Havana 3116 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations