Gene

tom1

ID

ZDB-GENE-060721-1

Name

target of myb1 membrane trafficking protein

Symbol

tom1 Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 3 Mapping Details/Browsers

Description

Predicted to be involved in intracellular protein transport. Orthologous to human TOM1 (target of myb1 membrane trafficking protein).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With tom1 Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
		?Immunodeficiency 85 and autoimmunity	619510

Associated With tom1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR002014	VHS domain
Domain	IPR004152	GAT domain
Family	IPR014645	Target of Myb protein 1
Homologous_superfamily	IPR008942	ENTH/VHS
Homologous_superfamily	IPR038425	GAT domain superfamily

Domain Details Per Protein

Protein	Length	ENTH/VHS	GAT domain	GAT domain superfamily	Target of Myb protein 1	VHS domain
UniProtKB:A0A2R8QER9 InterPro	431
UniProtKB:A0A0R4IY33 InterPro	454

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	tom1-201 (1) Ensembl	Havana	2067 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	tom1-202 (1) Ensembl	Havana	1601 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations