ZFIN is now using GRCz12tu for Genomic Data
Gene
chmp5a
- ID
- ZDB-GENE-060503-60
- Name
- charged multivesicular body protein 5a
- Symbol
- chmp5a Nomenclature History
- Previous Names
-
- si:dkey-216e9.3 (1)
- Type
- protein_coding_gene
- Location
- Chr: 2 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in vacuolar transport. Orthologous to human CHMP5 (charged multivesicular body protein 5).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR005024 | Snf7 family |
Domain Details Per Protein
| Protein | Additional Resources | Length | Snf7 family |
|---|---|---|---|
| UniProtKB:E7F143 | InterPro | 251 | |
| UniProtKB:A0AB40EB21 | InterPro | 219 | |
| UniProtKB:A0AC58HLY6 | InterPro | 167 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
chmp5a-201
(1)
|
Ensembl | 1,038 nt | ||
| mRNA |
chmp5a-202
(1)
|
Ensembl | 678 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers