Gene

aftphb

ID

ZDB-GENE-060503-388

Name

aftiphilin b

Symbol

aftphb Nomenclature History

Previous Names

si:ch211-154e15.9 (1)
si:dkey-148f10.6

Type

protein_coding_gene

Location

Chr: 17 Mapping Details/Browsers

Description

Predicted to have clathrin binding activity. Involved in cilium movement. Localizes to cytoplasm. Orthologous to human AFTPH (aftiphilin).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Choksi et al., 2014

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 2 figures from Choksi et al., 2014
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With aftphb Human Ortholog

No data available

Associated With aftphb Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR029205	Aftiphilin, clathrin-binding box
Family	IPR046359	Aftiphilin-like

Domain Details Per Protein

Protein	Length	Aftiphilin, clathrin-binding box	Aftiphilin-like
UniProtKB:A0A8M3AIZ7 InterPro	731
UniProtKB:A0A8M1PV90 InterPro	700
UniProtKB:A0A8M9PEU8 InterPro	700
UniProtKB:F1QB98 InterPro	731

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	aftphb-202 (1) Ensembl	Havana	856 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	aftphb-203 (1) Ensembl	Havana	2822 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	aftphb-002 (1) Ensembl	Havana	669 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations