Gene

pudp

ID
ZDB-GENE-050522-36
Name
pseudouridine 5'-phosphatase
Symbol
pudp Nomenclature History
Previous Names
  • hdhd1
  • hdhd1a
  • zgc:110639
Type
protein_coding_gene
Location
Chr: 1 Mapping Details/Browsers
Description
Predicted to have magnesium ion binding activity and phosphatase activity. Is expressed in epidermis and somite. Orthologous to human PUDP (pseudouridine 5'-phosphatase).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
7 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pudp Human Ortholog
No data available
Associated With pudp Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR006439 HAD hydrolase, subfamily IA
Family IPR041492 Haloacid dehalogenase-like hydrolase
Family IPR045228 Phosphatase Gpp1/Gpp2-like
Homologous_superfamily IPR023198 Phosphoglycolate phosphatase-like, domain 2
Homologous_superfamily IPR023214 HAD superfamily
Homologous_superfamily IPR036412 HAD-like superfamily
Domain Details Per Protein
Protein Length HAD hydrolase, subfamily IA HAD-like superfamily HAD superfamily Haloacid dehalogenase-like hydrolase Phosphatase Gpp1/Gpp2-like Phosphoglycolate phosphatase-like, domain 2
UniProtKB:Q503F9 214
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pudp-201 (1) Ensembl 769 nt
mRNA pudp-202 (1) Ensembl 1,397 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations