Gene

polr2j

ID

ZDB-GENE-050522-120

Name

RNA polymerase II subunit J

Symbol

polr2j Nomenclature History

Previous Names

rpb11 (1)
zgc:110005

Type

protein_coding_gene

Location

Chr: 5 Mapping Details/Browsers

Description

Predicted to enable DNA binding activity and protein dimerization activity. Predicted to contribute to DNA-directed 5'-3' RNA polymerase activity. Predicted to be involved in transcription by RNA polymerase II. Predicted to act upstream of or within DNA-templated transcription. Predicted to be located in nucleus. Predicted to be part of RNA polymerase II, core complex. Orthologous to several human genes including POLR2J (RNA polymerase II subunit J).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Levraud et al., 2007

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With polr2j Human Ortholog

No data available

Associated With polr2j Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR008193	DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site
Domain	IPR009025	DNA-directed RNA polymerase, RBP11-like dimerisation domain
Family	IPR022905	DNA-directed RNA polymerase subunit Rpo11-like
Family	IPR037685	RNA polymerase RBP11
Homologous_superfamily	IPR036603	RNA polymerase, RBP11-like subunit