Gene

pus7l

ID

ZDB-GENE-050419-188

Name

pseudouridine synthase 7 like

Symbol

pus7l Nomenclature History

Previous Names

si:dkey-234l24.3

Type

protein_coding_gene

Location

Chr: 4 Mapping Details/Browsers

Description

Predicted to have pseudouridine synthase activity. Predicted to be involved in pseudouridine synthesis. Predicted to localize to nucleus. Orthologous to human PUS7L (pseudouridine synthase 7 like).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With pus7l Human Ortholog

No data available

Associated With pus7l Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR011760	Pseudouridine synthase, TruD, insertion domain
Family	IPR001656	Pseudouridine synthase, TruD
Homologous_superfamily	IPR020103	Pseudouridine synthase, catalytic domain superfamily
Homologous_superfamily	IPR042214	Pseudouridine synthase, TruD, catalytic domain

Domain Details Per Protein

Protein	Length	Pseudouridine synthase, catalytic domain superfamily	Pseudouridine synthase, TruD	Pseudouridine synthase, TruD, catalytic domain	Pseudouridine synthase, TruD, insertion domain
UniProtKB:Q1L8I0 InterPro	643

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
antisense	ottdart00000041933 (1) Ensembl	Havana	752 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
antisense	ottdart00000041934 (1) Ensembl	Havana	730 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	pus7l-201 (1) Ensembl	Havana	585 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	pus7l-203 (1) Ensembl	Havana	623 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	pus7l-205 (1) Ensembl	Havana	2241 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	pus7l-206 (1) Ensembl	Havana	1627 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	pus7l-005 (1) Ensembl	Havana	505 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	pus7l-007 (1) Ensembl	Havana	668 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations