Gene

bbox1

ID
ZDB-GENE-050417-218
Name
butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1
Symbol
bbox1 Nomenclature History
Previous Names
  • wu:fj14g08
  • zgc:112179
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Description
Predicted to have gamma-butyrobetaine dioxygenase activity. Predicted to be involved in carnitine biosynthetic process. Predicted to localize to mitochondrion. Is expressed in male organism. Orthologous to human BBOX1 (gamma-butyrobetaine hydroxylase 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With bbox1 Human Ortholog
No data available
Associated With bbox1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR003819 TauD/TfdA-like domain
Domain IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal
Family IPR012775 Gamma-butyrobetaine hydroxylase-like
Family IPR050411 Alpha-ketoglutarate-dependent hydroxylases
Homologous_superfamily IPR038492 GBBH-like, N-terminal domain superfamily
Homologous_superfamily IPR042098 Taurine dioxygenase TauD-like superfamily
Domain Details Per Protein
Protein Length Alpha-ketoglutarate-dependent hydroxylases Gamma-butyrobetaine hydroxylase-like Gamma-butyrobetaine hydroxylase-like, N-terminal GBBH-like, N-terminal domain superfamily TauD/TfdA-like domain Taurine dioxygenase TauD-like superfamily
UniProtKB:Q567B2 325
UniProtKB:A0A1D5NSC9 433
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA bbox1-201 (1) Ensembl 2,196 nt
mRNA bbox1-202 (1) Ensembl 351 nt
mRNA bbox1-204 (1) Ensembl 781 nt
mRNA bbox1-205 (1) Ensembl 2,612 nt
mRNA bbox1-206 (1) Ensembl 1,445 nt
ncRNA bbox1-004 (1) Ensembl 395 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations