Gene

xndc1

ID

ZDB-GENE-050417-120

Name

xrcc1 N-terminal domain containing 1

Symbol

xndc1 Nomenclature History

Previous Names

zgc:110224 (1)

Type

protein_coding_gene

Location

Chr: 21 Mapping Details/Browsers

Description

Predicted to enable damaged DNA binding activity. Predicted to be involved in base-excision repair. Predicted to act upstream of or within single strand break repair. Predicted to be active in nucleus.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7166225 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With xndc1 Human Ortholog

No data available

Associated With xndc1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR002706	DNA-repair protein Xrcc1, N-terminal
Homologous_superfamily	IPR008979	Galactose-binding-like domain superfamily

Domain Details Per Protein

Protein	Length	DNA-repair protein Xrcc1, N-terminal	Galactose-binding-like domain superfamily
UniProtKB:Q568L6 InterPro	403

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	zgc:110224-201 (1) Ensembl	Ensembl		2,075 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations