ZFIN is now using GRCz12tu for Genomic Data
Gene

celf5a

ID
ZDB-GENE-050208-746
Name
cugbp, Elav-like family member 5a
Symbol
celf5a Nomenclature History
Previous Names
  • celf5
  • brunol5
  • si:ch211-202d4.1
Type
protein_coding_gene
Location
Chr: 22 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Predicted to enable RNA binding activity. Predicted to be located in cytoplasm and nucleus. Is expressed in central nervous system; neural tube; and retina. Orthologous to human CELF5 (CUGBP Elav-like family member 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from Thisse et al., 2005
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With celf5a Human Ortholog
No data available
Associated With celf5a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000504 RNA recognition motif domain
Domain IPR034648 CELF-3/4/5/6, RNA recognition motif 1
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Domain Details Per Protein
Protein Additional Resources Length CELF-3/4/5/6, RNA recognition motif 1 Nucleotide-binding alpha-beta plait domain superfamily RNA-binding domain superfamily RNA recognition motif domain
UniProtKB:A0A8M9P4B2 InterPro 551
UniProtKB:A0A8M9PVD1 InterPro 532
UniProtKB:A0A8M9P4B4 InterPro 542
UniProtKB:A0A8M9PVC6 InterPro 544
UniProtKB:B3DJA7 InterPro 528
UniProtKB:A0A8M9PVC1 InterPro 552
UniProtKB:A0A8M6YVG1 InterPro 539
UniProtKB:A0A8M9PJM3 InterPro 545
UniProtKB:A0A8M6YXB0 InterPro 537
UniProtKB:A0A8M9PJM7 InterPro 534
UniProtKB:A0A8M9PDY0 InterPro 550
UniProtKB:A0A8M9PRU9 InterPro 551
UniProtKB:A0A8M9PDY4 InterPro 535
UniProtKB:A0A8M6YUY3 InterPro 520
UniProtKB:A0A8M9PRV4 InterPro 543
UniProtKB:A0AB13AC37 InterPro 536
UniProtKB:A0AB32TBU2 InterPro 527
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA celf5a-201 (1)
Ensembl
Ensembl 1,699 nt
ZFIN BLAST
mRNA celf5a-202 (1)
Ensembl
Ensembl 1,519 nt
ZFIN BLAST
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations
Your Input Welcome
We welcome your input and comments. Please use this form to report issues or recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.
Please check the highlighted fields and try again.
Thank you for submitting comments. Your input has been emailed to ZFIN curators who may contact you if additional information is required.
Oops. Something went wrong. Please try again later.