Gene

taf11

ID

ZDB-GENE-040718-283

Name

TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor

Symbol

taf11 Nomenclature History

Previous Names

zgc:92784 (1)

Type

protein_coding_gene

Location

Chr: 23 Mapping Details/Browsers

Description

Predicted to have transcription coactivator activity and transcription factor binding activity. Predicted to be involved in RNA polymerase II preinitiation complex assembly. Predicted to localize to transcription factor TFIID complex. Orthologous to several human genes including TAF11 (TATA-box binding protein associated factor 11).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:92784 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With taf11 Human Ortholog

No data available

Associated With taf11 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR006809	TAFII28-like protein domain
Family	IPR045127	Transcription initiation factor TFIID subunit 11-like
Homologous_superfamily	IPR009072	Histone-fold

Domain Details Per Protein

Protein	Length	Histone-fold	TAFII28-like protein domain	Transcription initiation factor TFIID subunit 11-like
UniProtKB:Q6DGT1 InterPro	206
UniProtKB:A8KBY5 InterPro	206

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	taf11-203 (1) Ensembl	Havana	828 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	taf11-201 (1) Ensembl	Havana	919 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	taf11-202 (1) Ensembl	Havana	2842 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	taf11-004 (1) Ensembl	Havana	886 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations