ZFIN is now using GRCz12tu for Genomic Data
Gene
chmp4ba
- ID
- ZDB-GENE-040426-906
- Name
- charged multivesicular body protein 4Ba
- Symbol
- chmp4ba Nomenclature History
- Previous Names
-
- zgc:56112
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Involved in cilium assembly. Predicted to be located in nuclear envelope. Predicted to be part of ESCRT III complex. Predicted to be active in cytoplasmic side of plasma membrane and multivesicular body. Human ortholog(s) of this gene implicated in cataract 31 multiple types. Orthologous to several human genes including CHMP4B (charged multivesicular body protein 4B).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| cataract 31 multiple types | Alliance | Cataract 31, multiple types | 605387 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR005024 | Snf7 family |
Domain Details Per Protein
| Protein | Additional Resources | Length | Snf7 family |
|---|---|---|---|
| UniProtKB:B2GR99 | InterPro | 220 | |
| UniProtKB:Q7ZVC4 | InterPro | 220 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| antisense |
ottdart00000048470
(1)
|
Ensembl | 807 nt | ||
| mRNA |
chmp4ba-201
(1)
|
Ensembl | 2,011 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers