Gene

srp54

ID
ZDB-GENE-040426-818
Name
signal recognition particle 54
Symbol
srp54 Nomenclature History
Previous Names
  • zgc:55842 (1)
  • zgc:85713
Type
protein_coding_gene
Location
Chr: 17 Mapping Details/Browsers
Description
Predicted to contribute to GTPase activity. Involved in exocrine pancreas development and neutrophil chemotaxis. Predicted to localize to cytosol and signal recognition particle, endoplasmic reticulum targeting. Used to study Shwachman-Diamond syndrome. Human ortholog(s) of this gene implicated in severe congenital neutropenia. Orthologous to human SRP54 (signal recognition particle 54).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
5 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With srp54 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
severe congenital neutropenia 8 Alliance Neutropenia, severe congenital, 8, autosomal dominant 618752
Associated With srp54 Via Experimental Models
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain
Domain IPR003593 AAA+ ATPase domain
Domain IPR004125 Signal recognition particle, SRP54 subunit, M-domain
Domain IPR013822 Signal recognition particle SRP54, helical bundle
Family IPR006325 Signal recognition particle, SRP54 subunit, eukaryotic
Family IPR022941 Signal recognition particle, SRP54 subunit
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Homologous_superfamily IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily
Homologous_superfamily IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily
Domain Details Per Protein
Protein Length AAA+ ATPase domain P-loop containing nucleoside triphosphate hydrolase Signal recognition particle SRP54, helical bundle Signal recognition particle SRP54, N-terminal domain superfamily Signal recognition particle, SRP54 subunit Signal recognition particle, SRP54 subunit, eukaryotic Signal recognition particle, SRP54 subunit, GTPase domain Signal recognition particle, SRP54 subunit, M-domain Signal recognition particle, SRP54 subunit, M-domain superfamily
UniProtKB:Q7ZVN5 504
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations