Gene

exo1

ID
ZDB-GENE-040426-2828
Name
exonuclease 1
Symbol
exo1 Nomenclature History
Previous Names
  • fc16e04 (1)
  • wu:fc16e04 (1)
  • zgc:55521 (1)
Type
protein_coding_gene
Location
Chr: 17 Mapping Details/Browsers
Description
Predicted to have 5'-flap endonuclease activity and single-stranded DNA 5'-3' exodeoxyribonuclease activity. Predicted to be involved in DNA recombination and mismatch repair. Predicted to localize to nucleus. Is expressed in proliferative region. Orthologous to human EXO1 (exonuclease 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With exo1 Human Ortholog
No data available
Associated With exo1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR008918 Helix-hairpin-helix motif, class 2
Conserved_site IPR019974 XPG conserved site
Domain IPR006085 XPG, N-terminal
Domain IPR006086 XPG-I domain
Domain IPR037315 Exonuclease-1, H3TH domain
Domain IPR044752 Exonuclease 1-like, PIN-like domain
Family IPR006084 XPG/Rad2 endonuclease
Homologous_superfamily IPR029060 PIN-like domain superfamily
Homologous_superfamily IPR036279 5'-3' exonuclease, C-terminal domain superfamily
Repeat IPR019734 Tetratricopeptide repeat
Domain Details Per Protein
Protein Length 5'-3' exonuclease, C-terminal domain superfamily Exonuclease-1, H3TH domain Exonuclease 1-like, PIN-like domain Helix-hairpin-helix motif, class 2 PIN-like domain superfamily Tetratricopeptide repeat XPG conserved site XPG-I domain XPG, N-terminal XPG/Rad2 endonuclease
UniProtKB:Q803U7 806
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA exo1-201 (1) Ensembl 2,735 nt
mRNA exo1-202 (1) Ensembl 547 nt
mRNA exo1-203 (1) Ensembl 811 nt
mRNA exo1-205 (1) Ensembl 5,010 nt
ncRNA exo1-004 (1) Ensembl 608 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations