Gene

slc13a3

ID
ZDB-GENE-040426-2486
Name
solute carrier family 13 member 3
Symbol
slc13a3 Nomenclature History
Previous Names
  • zgc:77173
Type
protein_coding_gene
Location
Chr: 8 Mapping Details/Browsers
Description
Predicted to have citrate transmembrane transporter activity; sodium:dicarboxylate symporter activity; and succinate transmembrane transporter activity. Predicted to be involved in anion transmembrane transport and citrate transport. Predicted to localize to integral component of membrane. Is expressed in several structures, including digestive system; hatching gland; head; kidney; and periocular mesenchyme. Orthologous to human SLC13A3 (solute carrier family 13 member 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Strungaru et al., 2011
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
la026483TgTransgenic insertionUnknownUnknownDNA
sa21317Allele with one point mutationUnknownSplice SiteENU
sa38697Allele with one point mutationUnknownSplice SiteENU
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Sequence Targeting Reagents
No data available
Human Disease
Associated With slc13a3 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Leukoencephalopathy, acute reversible, with increased urinary alpha-ketoglutarate 618384
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Associated With slc13a3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR001898 Solute carrier family 13
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Domain Details Per Protein
Protein Length Solute carrier family 13
UniProtKB:Q6NWY4 596
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 8
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA slc13a3-201 (1) Ensembl 3,467 nt
mRNA slc13a3-202 (1) Ensembl 4,866 nt
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-109A10ZFIN Curated Data
EncodescDNAMGC:77173ZFIN Curated Data
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanSLC13A320
Phylogenetic tree (1)
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
MouseSlc13a32
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
Citations
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