ZFIN is now using GRCz12tu for Genomic Data
Gene
dtx3
- ID
- ZDB-GENE-040426-1640
- Name
- deltex E3 ubiquitin ligase 3
- Symbol
- dtx3 Nomenclature History
- Previous Names
-
- fi25g12
- wu:fi25g12
- zgc:66440
- Type
- protein_coding_gene
- Location
- Chr: 23 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm. Predicted to be active in nucleoplasm. Orthologous to human DTX3 (deltex E3 ubiquitin ligase 3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:66440 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR017907 | Zinc finger, RING-type, conserved site |
| Domain | IPR001841 | Zinc finger, RING-type |
| Domain | IPR039396 | Deltex, C-terminal |
| Family | IPR039398 | Deltex family |
| Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Homologous_superfamily | IPR039399 | Deltex, C-terminal domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Deltex, C-terminal | Deltex, C-terminal domain superfamily | Deltex family | Zinc finger, RING/FYVE/PHD-type | Zinc finger, RING-type | Zinc finger, RING-type, conserved site |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q4G0B5 | InterPro | 290 | ||||||
| UniProtKB:A0A8M2B9F2 | InterPro | 369 | ||||||
| UniProtKB:A0A8M3B638 | InterPro | 360 | ||||||
| UniProtKB:F1QUJ1 | InterPro | 384 | ||||||
| UniProtKB:A0AC58IJ58 | InterPro | 360 | ||||||
| UniProtKB:A0AC58IJ62 | InterPro | 360 | ||||||
| UniProtKB:A0AC58IJ69 | InterPro | 360 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
dtx3-206
(1)
|
Ensembl | 1,116 nt | ||
| mRNA |
zgc:66440-201
(1)
|
Ensembl | 2,585 nt | ||
| mRNA |
zgc:66440-202
(1)
|
Ensembl | 2,449 nt | ||
| mRNA |
zgc:66440-203
(1)
|
Ensembl | 566 nt | ||
| mRNA |
zgc:66440-204
(1)
|
Ensembl | 807 nt | ||
| mRNA |
zgc:66440-205
(1)
|
Ensembl | 614 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers