Gene

tial1

ID

ZDB-GENE-040426-1547

Name

TIA1 cytotoxic granule-associated RNA binding protein-like 1

Symbol

tial1 Nomenclature History

Previous Names

zgc:66130 (1)

Type

protein_coding_gene

Location

Chr: 13 Mapping Details/Browsers

Description

Predicted to enable DNA binding activity and RNA binding activity. Orthologous to human TIAL1 (TIA1 cytotoxic granule associated RNA binding protein like 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:66130 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With tial1 Human Ortholog

No data available

Associated With tial1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000504	RNA recognition motif domain
Domain	IPR003954	RNA recognition motif domain, eukaryotes
Domain	IPR034492	TIAR, RNA recognition motif 1
Domain	IPR034494	TIAR, RNA recognition motif 2
Domain	IPR034496	TIAR, RNA recognition motif 3
Homologous_superfamily	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily	IPR035979	RNA-binding domain superfamily

Domain Details Per Protein

Protein	Additional Resources	Length
UniProtKB:A0A8M2B2U9	InterPro	380
UniProtKB:E9QJJ0	InterPro	389
UniProtKB:A0A8M3B810	InterPro	248
UniProtKB:A0A8M2B338	InterPro	399
UniProtKB:A0A8M2B3J6	InterPro	388
UniProtKB:A0A8M3AZ31	InterPro	398
UniProtKB:Q7SXQ1	InterPro	370
UniProtKB:A0A8M9QJL2	InterPro	214
UniProtKB:A0A8M2B2Y3	InterPro	258
UniProtKB:A0AB32T614	InterPro	248

Transcripts

Genome Browsers

NCBI

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	tial1-201 (1) Ensembl	Ensembl	2,462 nt	Select Tool ZFIN BLAST
mRNA	tial1-202 (1) Ensembl	Ensembl	409 nt	Select Tool ZFIN BLAST
mRNA	tial1-204 (1) Ensembl	Ensembl	1,208 nt	Select Tool ZFIN BLAST
ncRNA	tial1-003 (1) Ensembl	Ensembl	807 nt	Select Tool ZFIN BLAST
ncRNA	tial1-004 (1) Ensembl	Ensembl	796 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations