ZFIN is now using GRCz12tu for Genomic Data
Gene
chmp5b
- ID
- ZDB-GENE-040426-1374
- Name
- charged multivesicular body protein 5b
- Symbol
- chmp5b Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in late endosome to vacuole transport via multivesicular body sorting pathway and vesicle budding from membrane. Predicted to act upstream of or within protein transport and vacuolar transport. Predicted to be located in cytosol and endosome membrane. Predicted to be active in multivesicular body. Is expressed in peripheral olfactory organ; solid lens vesicle; and ventral mesoderm. Orthologous to human CHMP5 (charged multivesicular body protein 5).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 6 figures from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:64125 (9 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR005024 | Snf7 family |
Domain Details Per Protein
| Protein | Additional Resources | Length | Snf7 family |
|---|---|---|---|
| UniProtKB:Q7T339 | InterPro | 220 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
chmp5b-201
(1)
|
Ensembl | 1,451 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers