Gene

sbds

ID
ZDB-GENE-040426-1116
Name
SBDS ribosome maturation factor
Symbol
sbds Nomenclature History
Previous Names
  • zgc:56700 (1)
Type
protein_coding_gene
Location
Chr: 15 Mapping Details/Browsers
Description
Involved in exocrine pancreas development; granulocyte differentiation; and ribosome biogenesis. Used to study Shwachman-Diamond syndrome. Human ortholog(s) of this gene implicated in Shwachman-Diamond syndrome; aplastic anemia; exocrine pancreatic insufficiency; and hematopoietic system disease. Is expressed in gut; liver; pancreas; and pharyngeal arch 3-7. Orthologous to human SBDS (SBDS ribosome maturation factor).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
5 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
12 figures from 3 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With sbds Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
aplastic anemia Alliance {Aplastic anemia, susceptibility to} 609135
Shwachman-Diamond syndrome Alliance Shwachman-Diamond syndrome 1 260400
Associated With sbds Via Experimental Models
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR018023 Ribosome maturation protein SBDS, conserved site
Domain IPR018978 Ribosome maturation protein SDO1/SBDS, central domain
Domain IPR019783 Ribosome maturation protein SDO1/SBDS, N-terminal
Domain IPR046928 Ribosome maturation protein SDO1/SBDS, C-terminal domain
Family IPR002140 Ribosome maturation protein Sdo1/SBDS
Family IPR039100 Ribosome maturation protein Sdo1/SBDS-like
Homologous_superfamily IPR036786 Ribosome maturation protein SBDS, N-terminal domain superfamily
Homologous_superfamily IPR037188 Ribosome maturation protein Sdo1/SBDS, central domain superfamily
Domain Details Per Protein
Protein Length Ribosome maturation protein SBDS, conserved site Ribosome maturation protein SBDS, N-terminal domain superfamily Ribosome maturation protein Sdo1/SBDS Ribosome maturation protein SDO1/SBDS, central domain Ribosome maturation protein Sdo1/SBDS, central domain superfamily Ribosome maturation protein SDO1/SBDS, C-terminal domain Ribosome maturation protein Sdo1/SBDS-like Ribosome maturation protein SDO1/SBDS, N-terminal
UniProtKB:Q7ZW65 231
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations