ZFIN is now using GRCz12tu for Genomic Data
Gene
zgc:56585
- ID
- ZDB-GENE-040426-1084
- Name
- zgc:56585
- Symbol
- zgc:56585 Nomenclature History
- Previous Names
-
- zgc:77077
- Type
- protein_coding_gene
- Location
- Chr: 21 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable 15-hydroxyicosatetraenoate dehydrogenase activity and 15-hydroxyprostaglandin dehydrogenase (NAD+) activity. Is expressed in segmental plate and yolk syncytial layer. Human ortholog(s) of this gene implicated in colon carcinoma and primary hypertrophic osteoarthropathy. Orthologous to human HPGD (15-hydroxyprostaglandin dehydrogenase).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 4 figures from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:56585 (5 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | NAD(P)-binding domain superfamily | Short-chain dehydrogenase/reductase, conserved site | Short-chain dehydrogenase/reductase SDR |
|---|---|---|---|---|---|
| UniProtKB:Q7ZTX3 | InterPro | 270 | |||
| UniProtKB:F1QBQ6 | InterPro | 270 | |||
| UniProtKB:A0AB13A996 | InterPro | 183 | |||
| UniProtKB:A0AC58IBD1 | InterPro | 270 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
zgc:56585-201
(1)
|
Ensembl | 1,053 nt | ||
| mRNA |
zgc:56585-202
(1)
|
Ensembl | 2,029 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers